genomic data
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Spread of DNA Databases sparks ethical concerns
Countries around the world are collecting genetic material from millions of citizens in the name of fighting crime and terrorism — and, according to critics, heading into uncharted ethical terrain. Read More »
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A Global Alliance for Genomic Data Sharing & Standards
In June, a group of 70 hospitals, research institutes, and technology companies from 40 countries formed the Global Alliance (pdf), a consortium to promote open standards and best practices for organizations producing, using, or sharing genomic and clinical data. Read More »
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Bringing Order to Potential Confusion of Gene Data
Scientists from research and health-care groups including Harvard University and the U.S. National Institutes of Health [NIH] are trying to create a way to standardize and share genetic information before the DNA-scanning field develops into a balkanized mess. Read More »
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Curoverse Raises $1.5 Million To Build Open Source Platform For Genomic And Biomedical Big Data
New Arvados open source project builds on software developed in Dr. George Church’s lab at Harvard Medical School. Read More »
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FDA Starts Beta-testing 'The Most Advanced Bioinformatics Platform in the World'
The FDA has started testing the precisionFDA platform it developed with DNAnexus. The closed beta test phase is the precursor to a more widespread rollout of the system, which the CEO of DNAnexus has described as being "the most advanced bioinformatics platform in the world." DNAnexus was enlisted by the FDA to help with the project in August...
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FHIR App Provides Precision Medicine Support at Point of Care
FHIR is helping to power a new precision medicine oncology app that brings clinical decision support to the point of care. Two of the most intriguing trends in healthcare may be able to work together to bring advanced clinical decision support directly to the point of care, suggest researchers who developed a FHIR-based precision medicine application that integrates with electronic health records...
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GenoSpace And The TranSMART Foundation Announce Partnership To Expand Data Sharing And Analytics
GenoSpace, LLC, a company that builds information systems capable of storing and integrating genomic information and other health data for clinical care and advanced research, today announced its support for the emerging open-source tranSMART data-sharing and analytics platform. Read More »
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How Big Data Is Taking On Breast Cancer — And Big Biotech
Now that the Supreme Court has decided that human genes can’t be patented, a group of researchers is using high-tech data science to better understand the genetic mutations associated with breast cancer. Read More »
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How Computer Clouds Could Help Cure Cancer
Computer clouds have been credited with making the workplace more efficient and giving consumers anytime-anywhere access to emails, photos, documents and music as well as helping companies crunch through masses of data to gain business intelligence. Read More »
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mCode Initiative Open Sources Common Cancer Data Platform and Standards to Improve EHR Data Interoperability
In an effort to advance cancer data sharing and improve the quality and coordination of patient care, three of the nation's leading health and technology organizations have established a core set of data elements and recommended technical specifications (the Minimal Common Oncology Data Elements, or "mCODE") that are essential for capturing and reporting the characteristics, treatments, and outcomes of every cancer patient and should be contained in each patient's electronic health record (EHR).
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Montefiore And Einstein Are Tapped By The White House For Precision Medicine Initiative
Montefiore Health System and Albert Einstein College of Medicine have been selected to be part of the White House's inaugural Precision Medicine Initiative Summit. Parsa Mirhaji, M.D., Ph.D., director of Clinical Research Informatics at Montefiore and Einstein is among an elite group of healthcare leaders from across the country who will participate in a roundtable today at the White House. The event will focus on efforts to integrate biological, clinical, environmental, and administrative data to advance innovations in research and improve the delivery of healthcare...
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Open Source Web App Helps Researchers Explore Cancer Genetics
Brown University computer scientists have developed a new interactive tool to help researchers and clinicians explore the genetic underpinnings of cancer. The tool — dubbed MAGI, for Mutation Annotation and Genome Interpretation — is an open-source web application that enables users to search, visualize, and annotate large public cancer genetics datasets, including data from The Cancer Genome Atlas (TCGA) project. “The main motivation for MAGI has been to reduce the computational burden required for researchers or doctors to explore and annotate cancer genomics data,” said Max Leiserson, a Ph.D. student at Brown who led the development of the tool.
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Seven Bridges Introduces Open Source Cancer Genomics Workflow
Seven Bridges, a Cambridge company that builds tool to help scientists process genomic data, has created a cloud-based workflow for analyzing cancer genomes. The workflow was presented at the Biology of Genomes conference at Cold Spring Harbor in May...
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The Not-So-Precise Side of Precision Medicine
The launch of the Precision Medicine Initiative in 2015, along with this year's Cancer Moonshot, have touted the promise of genomic data for population health and more personalized diagnosis. As a result, more consumers are seeking genetic testing and more researchers are contributing to these initiatives. But the healthcare industry isn't necessarily prepared for this shift. The popularity of genetic testing doesn't come without risks, according to Mayo Clinic's recent report, The Promise and Peril of Precision Medicine...
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Ticking All The Boxes For A Health Care Upgrade At Strata Rx
What is needed for successful reform of the health care system? Here’s what we all know: that a data-rich health care future is coming our way. And what it will look like, in large outlines. Health care reformers have learned that no single practice will improve the system. All of the following, which were discussed at O’Reilly’s recent Strata Rx conference, must fall in place. Read More »
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